USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: P05388 USC-OGP 2-DE database:  P05388 P05388 General information about the entry View entry in simple text format Entry name RLA0_HUMAN Primary accession number P05388 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=60S acidic ribosomal protein P0; AltName: Full=60S ribosomal protein L10E; AltName: Full=Large ribosomal subunit protein uL10 {ECO:0000303|PubMed:24524803};. Gene name Name=RPLP0 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1215: pI=5.57; Mw=36464 SPOT OGP-1218: pI=5.73; Mw=36260 Cross-references UniProtKB/Swiss-Prot P05388; RLA0_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name RLA0_HUMAN Primary accession number P05388 Secondary accession number(s) Q3B7A4 Q9BVK4 Sequence was last modified on  November 1, 1988 (version 1) Annotations were last modified on  March 15, 2017 (version 190) Name and origin of the protein Description RecName: Full=60S acidic ribosomal protein P0; AltName: Full=60S ribosomal protein L10E; AltName: Full=Large ribosomal subunit protein uL10 {ECO:0000303|PubMed:24524803}; Gene name Name=RPLP0 Encoded on Name=RPLP0 Keywords 3D-structure; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; Host-virus interaction; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M17885; AAA36470.1; -; mRNA EMBL AC004263; AAC05176.1; -; Genomic_DNA EMBL BC000087; AAH00087.1; -; mRNA EMBL BC000345; AAH00345.1; -; mRNA EMBL BC000752; AAH00752.1; -; mRNA EMBL BC001127; AAH01127.1; -; mRNA EMBL BC001834; AAH01834.1; -; mRNA EMBL BC003655; AAH03655.1; -; mRNA EMBL BC005863; AAH05863.1; -; mRNA EMBL BC008092; AAH08092.1; -; mRNA EMBL BC008594; AAH08594.1; -; mRNA EMBL BC009867; AAH09867.1; -; mRNA EMBL BC015173; AAH15173.1; -; mRNA EMBL BC015690; AAH15690.1; -; mRNA EMBL BC107717; AAI07718.1; -; mRNA EMBL AB007187; BAA25845.1; -; Genomic_DNA CCDS CCDS9193.1; -. [P05388-1]; . PIR A27125; R5HUP0; . RefSeq NP_000993.1; NM_001002.3. [P05388-1]; . RefSeq NP_444505.1; NM_053275.3. [P05388-1]; . UniGene Hs.546285; -; . PDB 4V6W; EM; 6.00 A; q=5-227 PDB 4V6X; EM; 5.00 A; Cq=1-317 PDB 5AJ0; EM; 3.50 A; AK=1-317 PDBsum 4V6W; -; . PDBsum 4V6X; -; . PDBsum 5AJ0; -; . ProteinModelPortal P05388; -; . SMR P05388; -; . BioGrid 112094; 204; . IntAct P05388; 51; . MINT MINT-193149; -; . STRING 9606.ENSP00000339027; -; . iPTMnet P05388; -; . PhosphoSitePlus P05388; -; . SwissPalm P05388; -; . BioMuta RPLP0; -; . DMDM 133041; -; . REPRODUCTION-2DPAGE P05388; -; . EPD P05388; -; . MaxQB P05388; -; . PaxDb P05388; -; . PeptideAtlas P05388; -; . PRIDE P05388; -; . TopDownProteomics P05388-1; -. [P05388-1]; . DNASU 6175; -; . Ensembl ENST00000228306; ENSP00000339027; ENSG00000089157. [P05388-1]; . Ensembl ENST00000313104; ENSP00000366471; ENSG00000089157. [P05388-2]; . Ensembl ENST00000392514; ENSP00000376299; ENSG00000089157. [P05388-1]; . Ensembl ENST00000551150; ENSP00000449328; ENSG00000089157. [P05388-1]; . GeneID 6175; -; . KEGG hsa:6175; -; . UCSC uc001txp.4; human. [P05388-1]; . CTD 6175; -; . DisGeNET 6175; -; . GeneCards RPLP0; -; . HGNC HGNC:10371; RPLP0; . HPA HPA003512; -; . MIM 180510; gene; . neXtProt NX_P05388; -; . OpenTargets ENSG00000089157; -; . PharmGKB PA34772; -; . eggNOG KOG0815; Eukaryota; . eggNOG COG0244; LUCA; . GeneTree ENSGT00390000017839; -; . HOGENOM HOG000210987; -; . HOVERGEN HBG000711; -; . InParanoid P05388; -; . KO K02941; -; . OMA IGTNDNP; -; . OrthoDB EOG091G0F47; -; . PhylomeDB P05388; -; . TreeFam TF300849; -; . Reactome R-HSA-156827; L13a-mediated translational silencing of Ceruloplasmin expression; . Reactome R-HSA-156902; Peptide chain elongation; . Reactome R-HSA-1799339; SRP-dependent cotranslational protein targeting to membrane; . Reactome R-HSA-192823; Viral mRNA Translation; . Reactome R-HSA-2408557; Selenocysteine synthesis; . Reactome R-HSA-6791226; Major pathway of rRNA processing in the nucleolus and cytosol; . Reactome R-HSA-72689; Formation of a pool of free 40S subunits; . Reactome R-HSA-72706; GTP hydrolysis and joining of the 60S ribosomal subunit; . Reactome R-HSA-72764; Eukaryotic Translation Termination; . Reactome R-HSA-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC); . Reactome R-HSA-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC); . ChiTaRS RPLP0; human; . GeneWiki RPLP0; -; . GenomeRNAi 6175; -; . PRO PR:P05388; -; . Proteomes UP000005640; Chromosome 12; . Bgee ENSG00000089157; -; . CleanEx HS_RPLP0; -; . ExpressionAtlas P05388; baseline and differential; . Genevisible P05388; HS; . GO GO:0005737; C:cytoplasm; IDA:UniProtKB; . GO GO:0036464; C:cytoplasmic ribonucleoprotein granule; IDA:ParkinsonsUK-UCL; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB; . GO GO:0030425; C:dendrite; IEA:Ensembl; . GO GO:0005783; C:endoplasmic reticulum; IDA:HPA; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005925; C:focal adhesion; IDA:UniProtKB; . GO GO:0030529; C:intracellular ribonucleoprotein complex; IDA:UniProtKB; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB; . GO GO:0071353; P:cellular response to interleukin-4; IEA:Ensembl; . GO GO:0000184; P:nuclear-transcribed mRNA catabolic process; nonsense-mediated decay; TAS:Reactome GO GO:0006364; P:rRNA processing; TAS:Reactome; . GO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome; . GO GO:0006412; P:translation; NAS:UniProtKB; . GO GO:0006413; P:translational initiation; TAS:Reactome; . GO GO:0019083; P:viral transcription; TAS:Reactome; . InterPro IPR030670; L10E_eukaryotes; . InterPro IPR001790; Ribosomal_L10P; . Pfam PF00466; Ribosomal_L10; 1; . PIRSF PIRSF039087; L10E; 1; .

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